PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG014407t1
Common NameTCM_014407
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 200aa    MW: 22768.1 Da    PI: 7.3956
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG014407t1genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.11.2e-15104163362
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                       ++kr rr+++NRe+ArrsR RKk++ieeL+  v++L++ N++L ++l +l +   +  +e
  Thecc1EG014407t1 104 DDKRLRRMISNRESARRSRMRKKQQIEELQSQVDQLQTINRQLSQKLINLLESNHETLQE 163
                       68******************************************9998887777666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-15102166IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.346104167IPR004827Basic-leucine zipper domain
PfamPF001703.8E-13105164IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-12106169No hitNo description
SuperFamilySSF579591.0E-11106156No hitNo description
CDDcd147021.03E-16107158No hitNo description
PROSITE patternPS000360109124IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MEAPDFEAHR NQPHATPNQS FFAFCPSQKT YTSAAHLNMQ SLEIAGNRSV QHGNSSQHPD  60
SSTNFSSRLS PNSQVHFPFH LFSPNSSSLS TEDEGREYQP SIVDDKRLRR MISNRESARR  120
SRMRKKQQIE ELQSQVDQLQ TINRQLSQKL INLLESNHET LQENAQLKER VSTLHMVLAD  180
VFTPPRNLED TSLEHKSAS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007037689.11e-144Basic leucine-zipper 70, putative
TrEMBLA0A061FXG41e-144A0A061FXG4_THECC; Basic leucine-zipper 70, putative
STRINGPOPTR_0015s03580.15e-48(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.13e-36basic leucine-zipper 70
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]